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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6005113 chr22:27037014 C/T CERK chr22:47080308-47134158:- -0.72 -5.93 5.74E-9 Box Plot
THCA rs6005113 chr22:27037014 C/T CHADL chr22:41625514-41636938:- -0.58 -6.86 2.2E-11 Box Plot
THCA rs6005113 chr22:27037014 C/T CHEK2 chr22:29083731-29138410:- -0.53 -6.41 3.4E-10 Box Plot
THCA rs6005113 chr22:27037014 C/T CHKB chr22:51017378-51039884:- -0.78 -7.52 2.68E-13 Box Plot
THCA rs6005113 chr22:27037014 C/T CHKB-CPT1B chr22:51007298-51021394:- -0.39 -6.58 1.23E-10 Box Plot
THCA rs6005113 chr22:27037014 C/T COMT chr22:19929130-19957498:+ -0.63 -6.9 1.68E-11 Box Plot
THCA rs6005113 chr22:27037014 C/T CRELD2 chr22:50311815-50321188:+ -0.44 -6.31 6.54E-10 Box Plot
THCA rs6005113 chr22:27037014 C/T CRKL chr22:21271714-21308037:+ -0.81 -8.47 3.01E-16 Box Plot
THCA rs6005113 chr22:27037014 C/T CSNK1E chr22:38686697-38714089:- -0.67 -8.73 4.28E-17 Box Plot
THCA rs6005113 chr22:27037014 C/T CYTSA chr22:24666786-24813707:+ -0.76 -10.49 2.67E-23 Box Plot
THCA rs6005113 chr22:27037014 C/T DDT chr22:24313554-24322660:- -0.65 -8.84 1.82E-17 Box Plot
THCA rs6005113 chr22:27037014 C/T DDX17 chr22:38879445-38903665:- -0.64 -8.22 1.93E-15 Box Plot
THCA rs6005113 chr22:27037014 C/T DEPDC5 chr22:32149937-32303020:+ -0.9 -9.2 1.08E-18 Box Plot
THCA rs6005113 chr22:27037014 C/T DGCR11 chr22:19033675-19035888:- -0.79 -6.8 3.18E-11 Box Plot
THCA rs6005113 chr22:27037014 C/T DGCR14 chr22:19117792-19132197:- -0.73 -8.8 2.47E-17 Box Plot